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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863227.1_cds_XP_016515599.1_27925
CDS Infomation

[gene=LOC107832299] [db_xref=GeneID:107832299] [protein=auxin transporter-like protein 2] [protein_id=XP_016515599.1] [location=complement(join(51233..51502,52587..52844,53661..53868,55420..55517,56622..56805,56901..57013,57713..57898,58566..58724))] [gbkey=CDS]
Sequence

ATGGAATCTTCAGACAAAGTAGTAGAGACGGTAATAGTTGGGAATTATGTAGAGATGGAG
ACTGAAGGAAAATCTAAAGATGTTAAGTCAAAAATCTCTAAGTTTTTTTGGCATGGTGGT
TCTGCTTATGATGCTTGGTTCAGCTGTGCCTCTAATCAGGTAGCTCAAGTGCTATTGACG
CTGCCATACTCATTTTCTCAACTAGGAATGCTTTCTGGGATTTCATTTCAGCTATTTTAC
GGTTTAATGGGTAGTTGGACAGCTTATCTTATTAGTATCCTCTATATTGAGTACAGAACC
AGAAAAGAAAGAGAAAAAGTTGATTTCCGCAATCACGTTATTCAGTGGTTCGAAGTTCTT
GATGGGCTACTTGGAAAACATTGGAGGAACGTGGGTTTGGCATTTAATTGCACTTTTCTC
CTGTTTGGATCAGTGATTCAACTCATTGCTTGTGCAAGCAATATATATTACATAAACGAT
AATTTGGACAAGAGAACATGGACTTATATTTTTGGTGCTTGTTGTGCCACCACAGTCTTC
ATTCCTTCTTTCCACAATTATAGAATCTGGTCTTTCCTTGGCTTGTTAATGACCACTTTC
ACTGCTTGGTATCTTACTGTTGCATCAATACTCCATGGCCAGGTGGAGGGGGTGAAGCAC
TCGGGTCCAACCAAGTTAGTACTATATTTCACAGGAGCCACAAACATTCTCTACACATTT
GGGGGACATGCTGTTACTGTGGAGGTAATGCATGCAATGTGGAAACCACAAAAGTTCAAG
GCAATTTACTTATGGGCAACACTCTATGTATTGACACTCACACTTCCATCAGCAGCAGCA
GTGTATTGGGCATTTGGTGATTTGCTTCTTGATCACTCCAATGCCTTCTCTCTCCTTCCA
AGAACACCCTTTAGAGACATGGCTGTCATACTTATGCTCATTCATCAGTTTATAACATTT
GGATTTGCTTGCACTCCATTGTATTTCGTATGGGAAAAGGCCATAGGCATGCACGAGTGC
AAGAGCCTGTGCACAAGGGCGGCGGCGAGGTTGCCGGTGGTGATTCCTATATGGTTTCTG
GCCATTGTTTTCCCTTTCTTTGGTCCTATCAATTCCACAGTTGGATCACTTCTAGTTAGC
TTCACTGTCTACATTATCCCTGCTCTTGCTCACATGTTTACCTTCAAATCAGCTGCTGCT
CGAGAGAATGCAGTAGAACAACCACCAAGATTTGTAGGAAGATGGGCTGGCACATTTACA
ATTAACATATTTGTAGTTGTTTGGGTATTCATTATTGGGTTTGGATTTGGTGGTTGGGCT
AGTATGCTCAATTTCATTCATCAAATTGACACATTTGGCCTTTTCACCAAGTGTTACCAA
TGCCCAATTCCTAAACAATTCCCCACCCCACCACCGCCCTACGCCGCCGCTCCACAGCCT
TCTCCGGCCAATTTAACTCACCCCCACCACCCATGA

Peptide Sequence

PEP ID

XP_016515599.1
PEP Infomation

PREDICTED: auxin transporter-like protein 2 [Nicotiana tabacum]
Sequence

MESSDKVVETVIVGNYVEMETEGKSKDVKSKISKFFWHGGSAYDAWFSCASNQVAQVLLT
LPYSFSQLGMLSGISFQLFYGLMGSWTAYLISILYIEYRTRKEREKVDFRNHVIQWFEVL
DGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVF
IPSFHNYRIWSFLGLLMTTFTAWYLTVASILHGQVEGVKHSGPTKLVLYFTGATNILYTF
GGHAVTVEVMHAMWKPQKFKAIYLWATLYVLTLTLPSAAAVYWAFGDLLLDHSNAFSLLP
RTPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCTRAAARLPVVIPIWFL
AIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSAAARENAVEQPPRFVGRWAGTFT
INIFVVVWVFIIGFGFGGWASMLNFIHQIDTFGLFTKCYQCPIPKQFPTPPPPYAAAPQP
SPANLTHPHHP

Transcript Sequence

Gene sequence data has not been registered.